Thanks to the video below. This is the easiest way to calibrate e-steps for a bowden tube system.
Here are the step by steps
Heat up the nozzle
Unscrew the thread or remove the PTFE tube right after the extruder
Snip the filament
Set the extruder to extrude 100mm
Snip the extruded filament and measure it
Take the measurement and use this formula
old_value * 100 / measurement
Retrieve the old value from the printer either by checking the LCD panel or using OctoPrint with the M503 command
M503
Look for “Steps per unit”

After using the formula, store the new value using the LCD or OctoPrint
For OctoPrint, you can store the settings with the command below (this sets it to 96.4)
M92 E96.4
How to Calibrate E steps on a Direct Drive
Measure from the filament entry point up to 100mm and mark with a sharpie. Measure another 20mm up and mark with a sharpie. Heat up the nozzle and extrude 100mm. Measure the distance from the extruder to the sharpie mark. Do the calculation based off 100mm to get your new value. Then, enter the values into the TH3D calculator - https://www.th3dstudio.com/estep-calculator/
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